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Table 1 Top 13 genes constitutively highly expressed in 83 transcriptome datasets

From: Promoter tools for further development of Aspergillus oryzae as a platform for fungal secondary metabolite production

Promoter name (for tested 5′-UTRs)a

Gene

Expression rank

Description in NCBI

5′-UTR size to next gene (bp) (size of tested sequence)

References

Minimum

Maximum

Median

P1

AFLA_090780

1

32

5

Translation elongation factor EF-1 alpha subunit (TEF1)

1309 (1029)

Kitamoto et al. [32]

–

AFLA_064900

1

9772

12

Hypothetical protein

525

 

P2

AFLA_025100

3

886

12

Glyceraldehyde 3-phosphate dehydrogenase (GpdA)

1792 (1024)

Punt et al. [57]

P3

AFLA_014570

1

313

12

Conserved hypothetical protein

3461 (1024)

This study

–

AFLA_050690

3

174

16

Mitochondrial ADP/ATP carrier protein

314

 

P4

AFLA_113120

5

177

18

GPI-anchored cell wall organization protein (Ecm33)

6093 (1024)

This study

–

AFLA_048690

1

1022

18

Alcohol dehydrogenase, putative

2918

 

–

AFLA_063260

1

11,577

19

Conserved hypothetical protein

409

 

–

AFLA_083050

1

98

21

40S ribosomal protein S25

345

 

P5

AFLA_052860

1

555

27

Chaperone/heat shock protein (Hsp12)

967 (967)

Koda et al. [56]

–

AFLA_047870

7

128

34

40S ribosomal protein S1

641

 

–

AFLA_006300

8

570

34

Nucleoside diphosphate kinase

2864

 

P6

AFLA_030930

6

140

34

Fructose-bisphosphate aldolase, class II

2864 (1024)

This study

  1. aGenes with 5′-UTRs shorter than 950 bp and those with maximum expression ranks larger than 1000 were omitted