Draft genome sequence of fastidious pathogen Ceratobasidium theobromae, which causes vascular-streak dieback in Theobroma cacao

Table 3 List of filtered transcriptome sequence variants in RNA-Seq libraries from VSD-infected stems

RNA-Seq library	No. of RNA reads in each library	No. of variants (QUAL ≥ 999, DP ≥ 30, and GQ ≥ 40)
		Homozygous alternate		Heterozygous
		SNPs	INDELs	SNPs	INDELs
INS_19	108,224	258	39	10	0
INS_23	283,192	620	135	26	0
INS_31	888,258	1357	280	34	2
INS_57	109,242	279	37	16	4

ISSN: 2054-3085