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Table 5 Primers used in this study

From: Selection markers for transformation of the sequenced reference monokaryon Okayama 7/#130 and homokaryon AmutBmut of Coprinopsis cinerea

Name

Sequence (5′-3′)

Purpose

ade8_f

GAATTGGGTACCGGGCCCCCCCTCGAGGTCGACTGGCCGTTCATAGCGATGTC (sequence upstream of the HindIII-site in pRS426 in italic, sequence upstream of ade8+ in normal letters)

Cloning of ade8+ in pCcAde8

ade8_r

GCCGCTCTAGAACTAGTGGATCCCCCGGGCTGAGCTCGTTTCCATCGTCATCA (sequence downstream of the EcoRI-site in pRS426 in italic, sequence downstream of ade8+ in normal letters)

Cloning of ade8+ in pCcAde8

Lcc5-fwd

CTCCCATCTACACACAACAAGCTTATCGCCATGTCGTTTGCTTGGAAAGCATTGGC (A. bisporus Pgpd sequence is in italic, lcc5 sequence in normal letters)

Cloning of lcc5 for overexpression in pYSK-lcc5

Lcc5-rev

CCACTGGCCCTCTGGTCAACTATAATATTATTTAGGGATACATAGGGAGCAAGTTCGAA (Tlcc1 sequence is in italic, lcc5 sequence in normal letters)

Cloning of lcc5 for overexpression in pYSK-lcc5

Lcc9-fwd

CTCCCATCTACACACAACAAGCTTATCGCCATGTCCAGGAAACTTTTCTCTCTCGCC (A. bisporus Pgpd sequence is in italic, lcc9 sequence in normal letters)

Cloning of lcc9 for overexpression in pYSK-lcc9

Lcc9-rev

CCACTGGCCCTCTGGTCAACTATAATATTATTTAAGGAGTGGGGACAATTTGGATAGAGGT (Tlcc1 sequence is in italic, lcc9 sequence in normal letters)

Cloning of lcc9 for overexpression in pYSK-lcc9

Lcc9-antisense 1-fwd

CTCCCATCTACACACAACAAGCTTATCGCCCGGGATTCTCATAGTTGTAAGTGCTGC (A. bisporus Pgpd sequence is in italic, lcc9 antisense 1 sequence in normal letters)

Cloning of lcc9-antisense fragment 1 in pYSK-lcc9-antisense-1

Lcc9- antisense 1-rev

CACTGGCCCTCTGGTCAACTATAATATTATAGATGGGCCTTGGACCTGCCG (Tlcc1 sequence is in italic, lcc9 antisense 1 sequence in normal letters)

Cloning of lcc9-antisense fragment 1 in pYSK-lcc9-antisense-1

Lcc9- antisense 2-fwd

CTCCCATCTACACACAACAAGCTTATCGCCCGGACCACTTCCTCCTGGGGCA (A. bisporus Pgpd sequence is in italic, lcc9 antisense 2 sequence in normal letters)

Cloning of lcc9-antisense fragment 2 in pYSK-lcc9-antisense-2

Lcc9- antisense 2-rev

CACTGGCCCTCTGGTCAACTATAATATTATCTCTCATGGTCGACGAAATCCAGATC (Tlcc1 sequence is in italic, lcc9 antisense 2 sequence in normal letters)

Cloning of lcc9-antisense fragment 2 in pYSK-lcc9-antisense-2

Pgpd-F

GATATCGAAGAAGAATTCAGAGGTCCGCAAGTA (A. bisporus Pgpd sequence, EcoRV site underlined)

Cloning of A. bisporus gpdII promotor for pCRII-hph-lcc9 vector construction

Pgpd-R

AAGTGGTCCGGGCGATAAGCTTGTTGTGTGTAGATGG (A. bisporus Pgpd sequence is in italic, lcc9 antisense 2 sequence in normal letters)

Cloning of A. bisporus gpdII promotor for pCRII-hph-lcc9 vector construction

Lcc9-antisense-hphF

GCTTATCGCCCGGACCACTTCCTCCTGGGGCA (A. bisporus Pgpd sequence is in italic, lcc9 antisense 2 sequence in normal letters)

Cloning of lcc9 antisense fragment 2 for pCRII-hph-lcc9 vector construction

Lcc9-antisense-hphR

TGCTATGACTCTCTCATGGTCGACGAAATCCAGATC (Tlcc9 sequence is in italic, lcc9 antisense 2 sequence in normal letters)

Cloning of lcc9 antisense fragment 2 for pCRII-hph-lcc9 vector construction

Tlcc9-F

ACCATGAGAGAGTCATAGCACATAGCCATACCGACAC (Tlcc9 sequence is in italic, lcc9 antisense 2 sequence in normal letters)

Cloning of C. cinerea lcc9 terminator for pCRII-hph-lcc9 vector construction

Tlcc9-R

GGGCCCGTCAAAGGAGTCAGCCCTTGGACATG (Tlcc9 sequence, ApaI site underlined)

Cloning of C. cinerea lcc9 terminator for pCRII-hph-lcc9 vector construction

DPf

ATGTCGATCCGCATCCTACTCCTC (sequence of ade8 from startcodon onwards)

Diagnosis PCR for nuclear ade8+ insertion

DPr

ATCCCAGGCGGAGAGATTGCG (sequence of ade8 with its last triplets for amino acids)

Diagnosis PCR for nuclear ade8+ insertion

PF

ACATCCACCATCTCCGTTTTCTCCCAT (A. bisporus Pgpd sequence)

PCR of OK130 co-transformants of lcc9-antisense-constructs

PR

TGACTATAGCAGCCTCCTACCACTG (Tlcc1 sequence)

PCR of OK130 co-transformants of lcc9-antisense-constructs

qRT-lcc9-F

ATGTCCAGGAAACTTTTCTCTCTCG (lcc9 sequence + 1 to + 25)

qRT-PCR of lcc9

qRT-lcc9-R

ATGTTCGAGACCGTCATGGTACT (reverse complementary lcc9 sequence of + 79 to + 101)

qRT-PCR of lcc9