Table 1 Percent increase in the expression of upregulated genes in the duplicated chromosomal region of the J4 strain

[A] RNA processing and modification

[B] Chromatin structure and dynamics

[C] Energy production and conversion

[D] Cell cycle control, cell division, chromosome partitioning

[E] Amino acid transport and metabolism

[F] Nucleotide transport and metabolism

[G] Carbohydrate transport and metabolism

[H] Coenzyme transport and metabolism

[I] Lipid transport and metabolism

[J] Translation, ribosomal structure and

biogenesis

[K] Transcription

[L] Replication, recombination and repair

[M] Cell wall/membrane/envelope biogenesis

[N] Cell motility

[O] Posttranslational modification, protein turnover, chaperones

[P] Inorganic ion transport and metabolism

[Q] Secondary metabolites biosynthesis, transport and catabolism

[R] General function prediction only

[S] Function unknown

[T] Signal transduction mechanisms

[U] Intracellular trafficking, secretion, and vesicular transport

[V] Defense mechanisms

[W] Extracellular structures

[Y] Nuclear structure

[Z] Cytoskeleton

Unannotated

Total