Table 2 FunCat classification of A. niger genes responsive to the treatment with caspofungin (CA), aureobasidin A (AbaA), FK506 and fenpropimorph (FP)

Sum of differentially expressed genes

236

96

141

24

Number of up-regulated genes

179

49

139

22

Number of down-regulated genes

57

47

2

2

Metabolism

42

11

26

16

Energy

2

2

2

-

Cell cycle and DNA processing

6

-

-

-

Transcription

14

3

3

-

Protein synthesis

4

-

1

-

Protein fate

10

7

23

1

Protein with binding function or cofactor requirement

3

1

-

-

Cellular transport, transport facilitation and transport routes

16

8

13

1

Cellular communication/signal transduction mechanism

5

1

4

1

Cell rescue, defense and virulence

3

3

4

-

Interaction with the environment

1

6

-

-

Cell fate

3

-

-

-

Biogenesis of cellular components

4

-

2

-

Unclassified proteins

123

54

63

5