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Table 2 Details of primers used for the cloning of sgRNA and quantitative RT-PCR

From: CRISPR/Cas9 mediated gene editing of transcription factor ACE1 for enhanced cellulase production in thermophilic fungus Rasamsonia emersonii

Gene Name

Accession Number

Sequences (5′–3′) of paired primers

Product Size (bp)

ACE1

Talem1p7_004885

ATCGCCAAGAGGAAGACG/ATGATGCGCTGTCTGGA

146

CreA

Talem1p7_016699

AGACACATTCGGACGCATC/TGTGCTGTGCCTTGTTACT

148

XlnR

Talem1p7_014973

CGATCAACATGCTACGCAATC/GGTGACGATCCATCACATAGAG

129

LPMO (AA9)

Talem1p7_002983

GCTGTTTCTTCTACTGCTCCT/TTCGATCTCCTCCGCAATAAC

123

β-Glucosidase A (GH3)

Talem1p7_000240

GCTTCGACCGTATCACACTT/TAGTTGGTCACAACCCAGTTC

115

Endoglucanse-B (GH5_5)

Talem1p7_004873

CTCGACTATCTCGCCAACAATAC/AGAACCTGCTCATACGCAATC

125

Endoglucanase (GH5_4)

Talem1p7_014763

CTTCACTACCGTTCCTCTTCTG/TAGCGGTGCGGATGAAATAG

104

Endoglucanase (GH7)

Talem1p7_015491

GTCCCAACGAAGAGGAATGT/CCGTTCGTGACGTACTGATT

115

CellobiohydrolaseC (GH6)

Talem1p7_000760

ACCTGAACGTGGCGAAAT/GCGTGTCCAGCATCAAGATA

115

Xylanase (GH10)

Talem1p7_010333

CCAGATGTTGCGGTGTCATA/TGGCCCTTGTAATGGGTAAC

138

β-Xylosidase (GH3)

Talem1p7_009060

GACCCAGAGCATGTCAAGAT/ATCCTGCTGCGTGATGATAG

114

α-Mannosidase (GH47)

Talem1p7_011066

CCCATCTCTGTCACTCTCTTTG/TTATACCCGTCCCAAGCAATC

144

EF-1

Talem1p7_017962

CCAGGGTCCCAAGAAAGAAA/TACCCAGGCCTAGCTTCTTA

111

VS_ACE1-F-902

Talem1p7_004885

ACCTTCCUGTCCCCAGGTTTTAGAGCTAGAAATAGCAAGTTAAA

–-

VS_ACE1-R-902

AGGAAGGUCGTCTGCATCATCCGTGAATCGAAC

–-

VS_CSN438-F

–-

GGGTTTAAUGATCACATAGATGCTCGGTTGACA

–-

VS_CSN790-R

–-

GGTCTTAAUACCCTGAGAAGATAGATGTGAATGTG

–-

ACE1-sgRNA

–-

GACGACCTTCCTGTCCCCAG

–-